Out of Scope

Out of scope #

Things mbf-fastq-processor will explicitly not do and that won’t be implemented.

Anything based on averaging phred scores #

Based on the average quality in a sliding window. Arithmetic averaging of phred scores is wrong.

Corresponding options in other software #

  • Trimmomatic SLIDINGWINDOW
  • fastp –cut_front
  • fastp –cut_tail
  • fastp –cut_right