TrimAtTag #

Trim the read at the position of a tag.

[[step]]
    action = "TrimAtTag"
    label = "mytag"
    direction = "Start" # or "End"
    keep_tag = false # if true, the tag sequence is kept in the read

This transformation trims the read at the position where a tag was found. The direction parameter determines whether to trim from the start or end of the tag, and keep_tag determines whether the tag sequence itself is retained.